Detailed information of gene12785.t1 in Actinoscyphia liui

Genomic Location: chr3:56074566...56094555
NR annotation: XP_020898695.1, SPARC-related modular calcium-binding protein 2 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9BQ16Testican-3 OS=Homo sapiens OX=9606 GN=SPOCK3 PE=1 SV=2
Q5RD69Testican-3 OS=Pongo abelii OX=9601 GN=SPOCK3 PE=2 SV=2
Q8BKV0Testican-3 OS=Mus musculus OX=10090 GN=Spock3 PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07648Kazal_2Kazal-type serine protease inhibitor domainDomainInterproscan
PF00086Thyroglobulin_1Thyroglobulin type-1 repeatDomainInterproscan
PF10591SPARC_Ca_bdgSecreted protein acidic and rich in cysteine Ca binding regionDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR051950FamilyDevelopmental regulator and protease inhibitorInterproscan
IPR000716DomainThyroglobulin type-1Interproscan
IPR018247Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR036857Homologous_superfamilyThyroglobulin type-1 superfamilyInterproscan
IPR002350DomainKazal domainInterproscan
IPR036058Homologous_superfamilyKazal domain superfamilyInterproscan
IPR019577DomainSPARC/Testican, calcium-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12352SECRETED MODULAR CALCIUM-BINDING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005604Cellular Componentbasement membraneInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0007160Biological Processcell-matrix adhesionInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan

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