Detailed information of gene12736.t1 in Actinoscyphia liui

Genomic Location: chr3:55330376...55331491
NR annotation: XP_020911288.1, zinc finger protein 622 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q969S3Cytoplasmic 60S subunit biogenesis factor ZNF622 OS=Homo sapiens OX=9606 GN=ZNF622 PE=1 SV=1
Q91VY9Cytoplasmic 60S subunit biogenesis factor ZNF622 OS=Mus musculus OX=10090 GN=Znf622 PE=1 SV=1
Q90Y35Cytoplasmic 60S subunit biogenesis factor ZNF622 OS=Gallus gallus OX=9031 GN=ZNF622 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12171zf-C2H2_jazZinc-finger double-stranded RNA-bindingFamilyInterproscan
PF12756zf-C2H2_2C2H2 type zinc-finger (2 copies)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR040025FamilyZinc finger protein 622/Rei1/Reh1Interproscan
IPR022755DomainZinc finger, double-stranded RNA bindingInterproscan
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR041661DomainZN622/Rei1/Reh1, zinc finger C2H2-typeInterproscan
IPR003604DomainMatrin/U1-C-like, C2H2-type zinc fingerInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13182ZINC FINGER PROTEIN 622Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0030687Cellular Componentpreribosome, large subunit precursorInterproscan
GO:0042273Biological Processribosomal large subunit biogenesisInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14816REI1; pre-60S factor REI1-Ribosome biogenesisko03009deepkoala

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