Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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Genomic Location: chr3:55315822...55330145
NR annotation: XP_020911291.1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [Exaiptasia diaphana]
| CDS | |
| gene12735.t1 | |
| Transcript |
| gene12735.t1 |
| Protein |
| gene12735.t1 |
| Uniprot term | Description |
|---|---|
| Q498E7 | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 OS=Xenopus laevis OX=8355 GN=smarcal1 PE=2 SV=1 |
| Q0P4U8 | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 OS=Xenopus tropicalis OX=8364 GN=smarcal1 PE=2 SV=1 |
| Q8BJL0 | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 OS=Mus musculus OX=10090 GN=Smarcal1 PE=1 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00271 | Helicase_C | Helicase conserved C-terminal domain | Domain | Interproscan |
| PF00176 | SNF2-rel_dom | SNF2-related domain | Domain | Interproscan |
| PF07443 | HARP | HepA-related protein (HARP) | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR010003 | Domain | HARP domain | Interproscan |
| IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR014001 | Domain | Helicase superfamily 1/2, ATP-binding domain | Interproscan |
| IPR001650 | Domain | Helicase, C-terminal domain-like | Interproscan |
| IPR000330 | Domain | SNF2, N-terminal | Interproscan |
| IPR038718 | Homologous_superfamily | SNF2-like, N-terminal domain superfamily | Interproscan |
| IPR049730 | Domain | SNF2/RAD5-like, C-terminal helicase domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR45766 | DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0006281 | Biological Process | DNA repair | Interproscan |
| GO:0031297 | Biological Process | replication fork processing | Interproscan |
| GO:0048478 | Biological Process | obsolete replication fork protection | Interproscan |
| GO:0005524 | Molecular Function | ATP binding | Interproscan |
| GO:0140658 | Molecular Function | ATP-dependent chromatin remodeler activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K14440 | SMARCAL1, HARP; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 | EC:5.6.2.- | Chromosome and associated proteins | ko03036 | deepkoala |