Detailed information of gene12543.t1 in Actinoscyphia liui

Genomic Location: chr3:51747248...51752725
NR annotation: XP_020913047.1, uncharacterized RNA-binding protein C365.04c [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9Y7Y3Uncharacterized RNA-binding protein C365.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC365.04c PE=4 SV=1
Q07623Nucleolar protein 6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=NOP6 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00076RRM_1RNA recognition motifDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR000504DomainRNA recognition motif domainInterproscan
IPR034228DomainNop6, RNA recognition motifInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23236EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4HInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0019843Molecular FunctionrRNA bindingInterproscan
GO:0042274Biological Processribosomal small subunit biogenesisInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14789NOP6; nucleolar protein 6-Ribosome biogenesisko03009deepkoala

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