Detailed information of gene12412.t1 in Actinoscyphia liui

Genomic Location: chr3:49892233...49896871
NR annotation: XP_031564095.1, homeobox protein MSX-2-like [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P18264Homeobox protein rough OS=Drosophila virilis OX=7244 GN=ro PE=3 SV=2
P10181Homeobox protein rough OS=Drosophila melanogaster OX=7227 GN=ro PE=2 SV=4
Q04281Homeobox protein XHOX-7.1 (Fragment) OS=Xenopus laevis OX=8355 PE=2 SV=1
 Gene family
Gene familySubfamily
Transcription Factors FamilyHomeobox

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00046HomeodomainHomeodomainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR017970Conserved_siteHomeobox, conserved siteInterproscan
IPR020479DomainHomeobox domain, metazoaInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR001356DomainHomeobox domainInterproscan
IPR000047Conserved_siteHelix-turn-helix motifInterproscan
IPR050848FamilyHomeobox domain-containing transcription factorsInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24333HOMEO BOX HB9 LIKE A-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K09362K09362; homeo domain only family, other-Transcription factorsko03000deepkoala

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