Detailed information of gene12212.t1 in Actinoscyphia liui

Genomic Location: chr3:46842045...46860198
NR annotation: XP_020907559.1, uncharacterized protein LOC110245615 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P97471Mothers against decapentaplegic homolog 4 OS=Mus musculus OX=10090 GN=Smad4 PE=1 SV=2
Q13485Mothers against decapentaplegic homolog 4 OS=Homo sapiens OX=9606 GN=SMAD4 PE=1 SV=1
Q9GKQ9Mothers against decapentaplegic homolog 4 OS=Sus scrofa OX=9823 GN=SMAD4 PE=2 SV=1
 Gene family
Gene familySubfamily
Transcription Factors FamilyMH1
Ubiquitin FamilyE3|E3 activity RING|PHD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00628PHDPHD-fingerDomainInterproscan
PF03165MH1MH1 domainDomainInterproscan
PF13771zf-HC5HC2HPHD-like zinc-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR034732DomainExtended PHD (ePHD) domainInterproscan
IPR019787DomainZinc finger, PHD-fingerInterproscan
IPR003619DomainMAD homology 1, Dwarfin-typeInterproscan
IPR001965DomainZinc finger, PHD-typeInterproscan
IPR036578Homologous_superfamilySMAD MH1 domain superfamilyInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR013019DomainMAD homology, MH1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45888HL01030P-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0005667Cellular Componenttranscription regulator complexInterproscan
GO:0003713Molecular Functiontranscription coactivator activityInterproscan
GO:0042393Molecular Functionhistone bindingInterproscan
GO:0042800Molecular Functionhistone H3K4 methyltransferase activityInterproscan
GO:0044666Cellular ComponentMLL3/4 complexInterproscan
GO:0045944Biological Processpositive regulation of transcription by RNA polymerase IIInterproscan

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