Detailed information of gene12093.t2 in Actinoscyphia liui

Genomic Location: chr3:44763874...44782295
NR annotation: XP_020908677.2, homeobox protein six1b [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P41817Homeobox protein CUP9 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=CUP9 PE=1 SV=1
Q9ER75Iroquois-class homeodomain protein IRX-6 OS=Mus musculus OX=10090 GN=Irx6 PE=2 SV=2
Q94165Homeobox protein ceh-34 OS=Caenorhabditis elegans OX=6239 GN=ceh-34 PE=1 SV=2
 Gene family
Gene familySubfamily
Transcription Factors FamilyHomeobox

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05920Homeobox_KNHomeobox KN domainFamilyInterproscan
PF16878SIX1_SDTranscriptional regulator, SIX1, N-terminal SD domainDomainInterproscan
PF00096zf-C2H2Zinc finger, C2H2 typeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR001356DomainHomeobox domainInterproscan
IPR008422DomainHomeobox KN domainInterproscan
IPR031701DomainHomeobox protein SIX1, N-terminal SD domainInterproscan
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR050888FamilyZinc Finger C2H2-type Transcription RegulatorsInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24406TRANSCRIPTIONAL REPRESSOR CTCFL-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan

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