Detailed information of gene12002.t1 in Actinoscyphia liui

Genomic Location: chr3:43194792...43217110
NR annotation: XP_028512814.1, uncharacterized protein LOC110232112 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q92752Tenascin-R OS=Homo sapiens OX=9606 GN=TNR PE=1 SV=3
Q05546Tenascin-R OS=Rattus norvegicus OX=10116 GN=Tnr PE=1 SV=1
Q8BYI9Tenascin-R OS=Mus musculus OX=10090 GN=Tnr PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00059Lectin_CLectin C-type domainDomainInterproscan
PF00629MAMMAM domain, meprin/A5/muDomainInterproscan
PF00147Fibrinogen_CFibrinogen beta and gamma chains, C-terminal globular domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR016186Homologous_superfamilyC-type lectin-like/link domain superfamilyInterproscan
IPR001304DomainC-type lectin-likeInterproscan
IPR014716Homologous_superfamilyFibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1Interproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR000998DomainMAM domainInterproscan
IPR016187Homologous_superfamilyC-type lectin foldInterproscan
IPR002181DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR051560FamilyMAM domain-containing proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23282APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR.Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016020Cellular ComponentmembraneInterproscan

TOP