Detailed information of gene11798.t2 in Actinoscyphia liui

Genomic Location: chr3:40107097...40148741
NR annotation: XP_020917086.1, vacuolar protein sorting-associated protein 8 homolog [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q0P5W1Vacuolar protein sorting-associated protein 8 homolog OS=Mus musculus OX=10090 GN=Vps8 PE=1 SV=1
Q8N3P4Vacuolar protein sorting-associated protein 8 homolog OS=Homo sapiens OX=9606 GN=VPS8 PE=1 SV=3
Q9VRX2Vacuolar protein sorting-associated protein 8 homolog OS=Drosophila melanogaster OX=7227 GN=Vps8 PE=1 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12816Vps8Golgi CORVET complex core vacuolar protein 8DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001841DomainZinc finger, RING-typeInterproscan
IPR025941DomainVacuolar protein sorting-associated protein 8, central domainInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR045111FamilyVacuolar protein sorting-associated protein Vps41/Vps8Interproscan
IPR001680RepeatWD40 repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12616VACUOLAR PROTEIN SORTING VPS41Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005770Cellular Componentlate endosomeInterproscan
GO:0006623Biological Processprotein targeting to vacuoleInterproscan
GO:0030897Cellular ComponentHOPS complexInterproscan
GO:0034058Biological Processendosomal vesicle fusionInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K20178VPS8; vacuolar protein sorting-associated protein 8-Membrane traffickingko04131deepkoala

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