Detailed information of gene11466.t1 in Actinoscyphia liui

Genomic Location: chr3:35231274...35252828
NR annotation: XP_048584417.1, neurogenic locus notch homolog protein 1 isoform X3 [Nematostella vectensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P25291Pancreatic secretory granule membrane major glycoprotein GP2 OS=Canis lupus familiaris OX=9615 GN=GP2 PE=1 SV=1
P07911Uromodulin OS=Homo sapiens OX=9606 GN=UMOD PE=1 SV=1
Q5R5C1Uromodulin OS=Pongo abelii OX=9601 GN=UMOD PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13517FG-GAP_3FG-GAP-like repeatRepeatInterproscan
PF00008EGFEGF-like domainDomainInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000742DomainEGF-like domainInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR028994Homologous_superfamilyIntegrin alpha, N-terminalInterproscan
IPR013517RepeatFG-GAP repeatInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR051830FamilyNeurogenic locus notch homologInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24033EGF-LIKE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K20049LRP1B; low-density lipoprotein receptor-related protein 1B-Membrane traffickingko04131deepkoala

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