Detailed information of gene11453.t1 in Actinoscyphia liui Gene info
Gene IDAnnotationChromosomeStartEndStrand
gene11453.t1CONTACTIN 5chr33489831535036637+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|SH3

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00435SpectrinSpectrin repeatDomainInterproscan
PF00621RhoGEFRhoGEF domainDomainInterproscan
PF07679I-setImmunoglobulin I-set domainDomainInterproscan
PF13716CRAL_TRIO_2Divergent CRAL/TRIO domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000219DomainDbl homology (DH) domainInterproscan
IPR001251DomainCRAL-TRIO lipid binding domainInterproscan
IPR001452DomainSH3 domainInterproscan
IPR001849DomainPleckstrin homology domainInterproscan
IPR002017RepeatSpectrin repeatInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR013098DomainImmunoglobulin I-setInterproscan
IPR013106DomainImmunoglobulin V-set domainInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR018159RepeatSpectrin/alpha-actininInterproscan
IPR035899Homologous_superfamilyDbl homology (DH) domain superfamilyInterproscan
IPR036028Homologous_superfamilySH3-like domain superfamilyInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR036865Homologous_superfamilyCRAL-TRIO lipid binding domain superfamilyInterproscan
IPR050958FamilyCell Adhesion and Cytoskeletal OrganizationInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR45080CONTACTIN 5Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005085Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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