Detailed information of gene11322.t1 in Actinoscyphia liui

Genomic Location: chr3:33209787...33235446
NR annotation: XP_020895125.2, LOW QUALITY PROTEIN: 26S proteasome non-ATPase regulatory subunit 11A-like [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
F6P3G426S proteasome non-ATPase regulatory subunit 11A OS=Danio rerio OX=7955 GN=psmd11a PE=2 SV=1
F6XBL226S proteasome non-ATPase regulatory subunit 11 OS=Xenopus tropicalis OX=8364 GN=psmd11 PE=3 SV=2
Q2KI4226S proteasome non-ATPase regulatory subunit 11 OS=Bos taurus OX=9913 GN=PSMD11 PE=2 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01399PCIPCI domainDomainInterproscan
PF18055RPN6_N26S proteasome regulatory subunit RPN6 N-terminal domainRepeatInterproscan
PF18503RPN6_C_helix26S proteasome subunit RPN6 C-terminal helix domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050871Family26S Proteasome and COP9 Signalosome ComponentsInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR000717DomainProteasome component (PCI) domainInterproscan
IPR040773Domain26S proteasome regulatory subunit Rpn6, N-terminalInterproscan
IPR040780Domain6S proteasome subunit Rpn6, C-terminal helix domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR1067826S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 11/COP9 SIGNALOSOME COMPLEX SUBUNIT 2Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005198Molecular Functionstructural molecule activityInterproscan
GO:0006511Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0008541Cellular Componentproteasome regulatory particle, lid subcomplexInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03036PSMD11, RPN6; 26S proteasome regulatory subunit N6-Proteasomeko03051deepkoala

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