Detailed information of gene11259.t1 in Actinoscyphia liui

Genomic Location: chr3:32376136...32395007
NR annotation: XP_020906922.1, 5'-3' exoribonuclease 2 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9DBR15'-3' exoribonuclease 2 OS=Mus musculus OX=10090 GN=Xrn2 PE=1 SV=1
Q5ZIP45'-3' exoribonuclease 2 OS=Gallus gallus OX=9031 GN=XRN2 PE=2 SV=1
Q9H0D65'-3' exoribonuclease 2 OS=Homo sapiens OX=9606 GN=XRN2 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03159XRN_NXRN 5'-3' exonuclease N-terminusFamilyInterproscan
PF17846XRN_MXrn1 helical domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004859DomainXrn1, N-terminalInterproscan
IPR017151Family5'-3' exoribonuclease type 2Interproscan
IPR027073Family5'-3' exoribonucleaseInterproscan
IPR041412DomainXrn1, helical domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR123415'->3' EXORIBONUCLEASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0004527Molecular Functionexonuclease activityInterproscan
GO:0004534Molecular Function5'-3' RNA exonuclease activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006139Biological Processnucleobase-containing compound metabolic processInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12619XRN2, RAT1; 5'-3' exoribonuclease 2EC:3.1.13.-
Transfer RNA biogenesisko03016deepkoala

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