Detailed information of gene11116.t2 in Actinoscyphia liui

Genomic Location: chr3:30264985...30278530
NR annotation: XP_020917382.1, vacuolar protein sorting-associated protein 16 homolog [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9H269Vacuolar protein sorting-associated protein 16 homolog OS=Homo sapiens OX=9606 GN=VPS16 PE=1 SV=2
Q5E9L7Vacuolar protein sorting-associated protein 16 homolog OS=Bos taurus OX=9913 GN=VPS16 PE=2 SV=1
Q920Q4Vacuolar protein sorting-associated protein 16 homolog OS=Mus musculus OX=10090 GN=Vps16 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04841Vps16_NVps16, N-terminal regionRepeatInterproscan
PF04840Vps16_CVps16, C-terminal regionRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016534FamilyVacuolar protein sorting-associated protein 16Interproscan
IPR006926DomainVps16, N-terminalInterproscan
IPR038132Homologous_superfamilyVps16, C-terminal domain superfamilyInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR006925DomainVps16, C-terminalInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12811VACUOLAR PROTEIN SORTING VPS16Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006886Biological Processintracellular protein transportInterproscan
GO:0007033Biological Processvacuole organizationInterproscan
GO:0003779Molecular Functionactin bindingInterproscan
GO:0005765Cellular Componentlysosomal membraneInterproscan
GO:0005768Cellular ComponentendosomeInterproscan
GO:0016197Biological Processendosomal transportInterproscan
GO:0030897Cellular ComponentHOPS complexInterproscan
GO:0042144Biological Processvacuole fusion, non-autophagicInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K20180VPS16; vacuolar protein sorting-associated protein 16-Membrane traffickingko04131deepkoala

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