Detailed information of gene11095.t1 in Actinoscyphia liui

Genomic Location: chr3:29954252...29959270
NR annotation: XP_028516193.1, meiotic recombination protein DMC1/LIM15 homolog [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q61880Meiotic recombination protein DMC1/LIM15 homolog OS=Mus musculus OX=10090 GN=Dmc1 PE=1 SV=1
Q14565Meiotic recombination protein DMC1/LIM15 homolog OS=Homo sapiens OX=9606 GN=DMC1 PE=1 SV=2
P37384Meiotic recombination protein DMC1 homolog OS=Lilium longiflorum OX=4690 GN=LIM15 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08423Rad51Rad51DomainInterproscan
PF14520HHH_5Helix-hairpin-helix domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR020588DomainDNA recombination and repair protein RecA-like, ATP-binding domainInterproscan
IPR016467FamilyDNA recombination and repair protein, RecA-likeInterproscan
IPR011940FamilyMeiotic recombination protein Dmc1Interproscan
IPR010995Homologous_superfamilyDNA repair Rad51/transcription factor NusA, alpha-helicalInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR020587DomainDNA recombination and repair protein RecA, monomer-monomer interfaceInterproscan
IPR003593DomainAAA+ ATPase domainInterproscan
IPR013632DomainDNA recombination and repair protein Rad51-like, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22942RECA/RAD51/RADA DNA STRAND-PAIRING FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0140664Molecular FunctionATP-dependent DNA damage sensor activityInterproscan
GO:0000150Molecular FunctionDNA strand exchange activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0007131Biological Processreciprocal meiotic recombinationInterproscan
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0006259Biological ProcessDNA metabolic processInterproscan
GO:0008094Molecular FunctionATP-dependent activity, acting on DNAInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0000730Biological ProcessDNA recombinase assemblyInterproscan
GO:0000794Cellular Componentcondensed nuclear chromosomeInterproscan
GO:0003690Molecular Functiondouble-stranded DNA bindingInterproscan
GO:0003697Molecular Functionsingle-stranded DNA bindingInterproscan
GO:0006312Biological Processmitotic recombinationInterproscan
GO:0042148Biological ProcessDNA strand invasionInterproscan
GO:0070192Biological Processchromosome organization involved in meiotic cell cycleInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10872DMC1; meiotic recombination protein DMC1-Chromosome and associated proteinsko03036deepkoala

TOP