Detailed information of gene11019.t1 in Actinoscyphia liui

Genomic Location: chr3:29036986...29038905
NR annotation: XP_020901503.1, uncharacterized protein LOC110240061 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q10002Apurinic-apyrimidinic endonuclease OS=Caenorhabditis elegans OX=6239 GN=apn-1 PE=2 SV=2
Q89YT0Probable endonuclease 4 OS=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / JCM 5827 / CCUG 10774 / NCTC 10582 / VPI-5482 / E50) OX=226186 GN=nfo PE=3 SV=1
Q5LG28Probable endonuclease 4 OS=Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / CCUG 4856 / JCM 11019 / LMG 10263 / NCTC 9343 / Onslow / VPI 2553 / EN-2) OX=272559 GN=nfo PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01261AP_endonuc_2Xylose isomerase-like TIM barrelDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001719FamilyAP endonuclease 2Interproscan
IPR013022DomainXylose isomerase-like, TIM barrel domainInterproscan
IPR018246Binding_siteAP endonuclease 2, zinc binding siteInterproscan
IPR036237Homologous_superfamilyXylose isomerase-like superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21445ENDONUCLEASE IV ENDODEOXYRIBONUCLEASE IVInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0003906Molecular FunctionDNA-(apurinic or apyrimidinic site) endonuclease activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0006284Biological Processbase-excision repairInterproscan
GO:0008081Molecular Functionphosphoric diester hydrolase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10771APEX1; AP endonuclease 1EC:3.1.11.2
DNA repair and recombination proteinsko03400deepkoala

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