Detailed information of gene10987.t1 in Actinoscyphia liui

Genomic Location: chr3:28632775...28638371
NR annotation: XP_020899189.1, uncharacterized protein LOC110237907 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8C2A2tRNA-splicing endonuclease subunit Sen54 OS=Mus musculus OX=10090 GN=Tsen54 PE=2 SV=2
Q7Z6J9tRNA-splicing endonuclease subunit Sen54 OS=Homo sapiens OX=9606 GN=TSEN54 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12928tRNA_int_end_N2tRNA-splicing endonuclease subunit sen54 N-termDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR024336DomaintRNA-splicing endonuclease, subunit Sen54, N-terminalInterproscan
IPR036740Homologous_superfamilytRNA intron endonuclease, N-terminal domain superfamilyInterproscan
IPR024337FamilytRNA-splicing endonuclease, subunit Sen54Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21027TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN54Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000213Molecular FunctiontRNA-intron endonuclease activityInterproscan
GO:0006388Biological ProcesstRNA splicing, via endonucleolytic cleavage and ligationInterproscan
GO:0000214Cellular ComponenttRNA-intron endonuclease complexInterproscan
GO:0000379Biological ProcesstRNA-type intron splice site recognition and cleavageInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K15326TSEN54; tRNA-splicing endonuclease subunit Sen54-Transfer RNA biogenesisko03016deepkoala

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