Detailed information of gene10747.t1 in Actinoscyphia liui

Genomic Location: chr3:25211173...25242351
NR annotation: XP_020899109.1, ribosome biogenesis protein TSR3 homolog [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5HZH218S rRNA aminocarboxypropyltransferase OS=Mus musculus OX=10090 GN=Tsr3 PE=1 SV=1
Q9UJK018S rRNA aminocarboxypropyltransferase OS=Homo sapiens OX=9606 GN=TSR3 PE=1 SV=1
Q1209418S rRNA aminocarboxypropyltransferase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TSR3 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04749PLAC8PLAC8 familyFamilyInterproscan
PF04034Ribo_biogen_CRibosome biogenesis protein, C-terminalDomainInterproscan
PF04068RLIPossible Fer4-like domain in RNase L inhibitor, RLIFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR022968Family16S/18S rRNA aminocarboxypropyltransferase Tsr3Interproscan
IPR006461FamilyPLAC8 motif-containing proteinInterproscan
IPR007177Domain16S/18S rRNA aminocarboxypropyltransferase Tsr3, C-terminalInterproscan
IPR007209DomainRNase L inhibitor RLI-like, possible metal-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR20426RIBOSOME BIOGENESIS PROTEIN TSR3 HOMOLOGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006364Biological ProcessrRNA processingInterproscan
GO:0016740Molecular Functiontransferase activityInterproscan
GO:0030490Biological Processmaturation of SSU-rRNAInterproscan
GO:0106388Molecular Function18S rRNA aminocarboxypropyltransferase activityInterproscan

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