Detailed information of gene10531.t1 in Actinoscyphia liui

Genomic Location: chr3:22765720...22775107
NR annotation: XP_020908720.1, uncharacterized protein LOC110246697 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A0A0B5RUB0Trimethylamine transporter OS=Myroides profundi OX=480520 GN=tmaT PE=1 SV=1
Q87NG3Glycine betaine transporter 1 OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) OX=223926 GN=VP1905 PE=1 SV=1
Q87PP5Glycine betaine/proline/choline/ectoine transporter VP1456 OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) OX=223926 GN=VP1456 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04749PLAC8PLAC8 familyFamilyInterproscan
PF02028BCCTBCCT, betaine/carnitine/choline family transporterFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000060FamilyBCCT transporter familyInterproscan
IPR018093Conserved_siteBCCT transporter, conserved siteInterproscan
IPR006461FamilyPLAC8 motif-containing proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR30047HIGH-AFFINITY CHOLINE TRANSPORT PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0006810Biological ProcesstransportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0016021Cellular ComponentmembraneInterproscan
GO:0022857Molecular Functiontransmembrane transporter activityInterproscan
GO:0071705Biological Processnitrogen compound transportInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02168betT, betS; choline/glycine/proline betaine transport protein-Transportersko02000deepkoala

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