Detailed information of gene09950.t1 in Actinoscyphia liui

Genomic Location: chr3:13278479...13282955
NR annotation: XP_020914202.1, ribosomal RNA-processing protein 7 homolog A [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9Y3A4Ribosomal RNA-processing protein 7 homolog A OS=Homo sapiens OX=9606 GN=RRP7A PE=1 SV=2
Q5RA17Ribosomal RNA-processing protein 7 homolog A OS=Pongo abelii OX=9601 GN=RRP7A PE=2 SV=1
Q9D1C9Ribosomal RNA-processing protein 7 homolog A OS=Mus musculus OX=10090 GN=Rrp7a PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12923RRP7Ribosomal RNA-processing protein 7 (RRP7) C-terminal domainDomainInterproscan
PF17799RRM_Rrp7Rrp7 RRM-like N-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR024326DomainRibosomal RNA-processing protein 7, C-terminal domainInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR000504DomainRNA recognition motif domainInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR040446FamilyRibosomal RNA-processing protein 7Interproscan
IPR040447DomainRrp7, RRM-like N-terminal domainInterproscan
IPR034890DomainRrp7A, RNA recognition motifInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13191RIBOSOMAL RNA PROCESSING PROTEIN 7-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0000028Biological Processribosomal small subunit assemblyInterproscan
GO:0006364Biological ProcessrRNA processingInterproscan
GO:0032545Cellular ComponentCURI complexInterproscan
GO:0034456Cellular ComponentUTP-C complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14545RRP7; ribosomal RNA-processing protein 7-Ribosome biogenesisko03009deepkoala

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