Gene detail

Detailed information of gene08981.t1 in Actinoscyphia liui Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
gene08981.t1	UNCHARACTERIZED	chr11	18497864	18538651	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

gene08981.t1

TTCAAAGGTAGATCTCATTGTGGATGCTGACAAAGGCTTCAACTTCTCATTCGCTGACGACTCGTTCGTCTGTCAAAAGAAAAACCATTTCCAAATCACTGTCAATGTGAACACAGAAAGTACTGCTAAGTACATCAAAGTCAAGGACACGTTTAAACCCATCGATAAGTTCAAAATCCATTTGTTTGGCGTCAAGGTCGAGTCAATTAACTCCACTATCAAGGTTGAACAATCACAAGCTGACAGAAGCAAACGGCCATATGAGCCTGCTGTTATGCCTGCCCCAGGGCCAGAAGCATCGCGAATGACAATAGGACGACTACACTTTAGTGAAACAACGTCTAATAATATGAGGAAAAAAGGAAAACCAAATCCTGACCAAAGATACTTCATGCTTGCTGTCGCTCTGCATGCTCACACCAAGAACGAAAACCAACTCATTTATGCTACAGTGTCTGATCGCATCATAGTCAGAGCTTCAAATCCGGGACAATTCGAAAATGATGTGGAAGTAGTATGGTCACGTGGTCACACATCTGACTCAGTGTTCAGAGTGGGTCGAGTAGGCATAAACACAGACAAACCATGTGAATCGTTGTCAGTTCATGGTAATATACGAGTGTCTGGTAGAATACTGGTGCCGTCAGACATAAGAATCAAAGAAAACTTAACTGAGGTTGACAGCAGAGAACAACTGCGCAATGTATCCAAGATGAAGTTGTACCGATATAGTTACAGTCAAGAGTACCTGGACGTGGCTGGTACACACATCGACCCTGACACTGGGGTCATTGCACAGCAAGTCCAGCAGGTCTTACCTGATGCTGTCAAAGAATCTGAAGACTTAAAACTTTTAGATGGCAAAACAATAGAAAAGTTCCTAGTTGTCAATAAGGAACGTATATTTATGGAGAATGTCGGAGCTGTCAAAGAGCTCTGTAAACTAACAGACAATCTAGAGATACGAATCAACGAACTAGAGCAGGTCGGTAAGAAACTACATTCGCGCCGGCGAGCAGATACGGCCAGCAGTTGTTTTAGTAACTTATCGAGAGCAAGTTCGTCCAGTCATAGTTCGTCCGCACGAAGCAGCCAAAACGAACGTACTCCAGCACGAGAAAACAAATCTGGTTGCCATGGACACCGTTACCGCTGCCCAAAACATGACTGTCATCAACAGCGATGCCATCAGGAAGTAGTTCTAGACGAGCCAAGTTTGTGTACACCTCGCTTTATGCAGTTCGTTATCGTCACCCTTGTACTCGTCATGTCATTAAGTATCGGCGCAATGGTGACTCTGTACATCATGCAAGACTCGAAACAAGACGGTTACCTTGGTGATAGCTCTGAAGCATTCCAACATGGCGTTCCTGAAGCGAACGTCACTACTAAGCCCAAGACTTCTAGTTTCCCTTCTAGTAGCATTAGCCAGAAGACAACAGAGATAGCCATGGCTACAAGTTCACATCCATCACCTATTGTAATACTTTCTACTTCACAAGCAATCACAACCAGTAGCAGCACAAAGGAGATCACACCTACACCTACTGGTAACAGTACGAAGAATTCGACGTCATCCATGGCCAAGCCAGACCATCCCGTACTGACAGAGGTTACACCCCACCCCACCCCTACGACCACACCCATACCTGTATGTCATTGCTGTAGGAATGTTGAGAACTGTAACTCGGTTCCGAACAAGCTGCTATCTAATAAACCAATTTACTATGAGATTTCCAATGCTTTAGCTCCTGCATCGAAATTCTCAAAAGATGTCACACTTCGAATCGTCGAGAAGAATTATCACCTAAATTGTGACATTTGCGGATCGACAAATGAATCTTTCTACATCCCTGTCAGCAGTTCTGTCCCCTTCCAACCAATTACAGTTGAAATCAACTCTACAAGCGATACCTTGGTGCTACATTGCTCTAACGTCTATCGATTACAATGTCCAGAAATGGTTTCTCAACCATCTTATGATACTGTATTCACTAAGGACACGTGGAAGAAACATCACACGTGGAAACTTCCACCTGCTTTCTATTTTTCCAGCAAATTTAGATTTCGTGTCGTGAATAAATCGCTAAACCCGAGCGCCCCTCGAGTAAACTGCTCGTCAACAAGAAGTGGTTCGGCACATTTATTCAAAGACTACTATATTCATTTTATACGGGTTTGTAAAACATAGGCTTTTGTAGGTATATCTATAGGTATAAATCTAACGTTGTTCATAACTATCAAAGTAAGACCCCAAAGTGTTCTGGGTAATCAAAAGACAGAATGGCACACCATAGATTAGGCTCGATTTCCAGCCAGCTGTGTAACCTTGCACATCACAAAACCGGCTGGAAAT

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13887	MYRF_ICA	Myelin regulatory factor ICA domain	Domain	Interproscan
PF13888	MRF_C2	Myelin gene regulatory factor C-terminal domain 2	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR025719	Domain	Myelin gene regulatory factor C-terminal domain 2	Interproscan
IPR026932	Domain	Myelin gene regulatory factor, ICA domain	Interproscan
IPR030392	Domain	Intramolecular chaperone auto-processing domain	Interproscan
IPR051577	Family	Myelin Regulatory Factor-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13029	UNCHARACTERIZED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003700	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005789	Cellular Component	endoplasmic reticulum membrane	Interproscan
GO:0016540	Biological Process	protein autoprocessing	Interproscan
GO:0043565	Molecular Function	sequence-specific DNA binding	Interproscan
GO:0045893	Biological Process	positive regulation of DNA-templated transcription	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-