Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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Genomic Location: chr11:16422771...16428065
NR annotation: UBT01840.1, elongation factor, partial [Conus ammiralis]
| CDS | |
| gene08857.t1 | |
| Transcript |
| gene08857.t1 |
| Protein |
| gene08857.t1 |
| Uniprot term | Description |
|---|---|
| P53013 | Elongation factor 1-alpha OS=Caenorhabditis elegans OX=6239 GN=eef-1A.1 PE=3 SV=1 |
| Q92005 | Elongation factor 1-alpha OS=Danio rerio OX=7955 GN=eef1a PE=2 SV=1 |
| P29520 | Elongation factor 1-alpha OS=Bombyx mori OX=7091 PE=2 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00009 | GTP_EFTU | Elongation factor Tu GTP binding domain | Domain | Interproscan |
| PF03143 | GTP_EFTU_D3 | Elongation factor Tu C-terminal domain | Domain | Interproscan |
| PF03144 | GTP_EFTU_D2 | Elongation factor Tu domain 2 | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR000795 | Domain | Translational (tr)-type GTP-binding domain | Interproscan |
| IPR004539 | Family | Translation elongation factor EF1A, eukaryotic/archaeal | Interproscan |
| IPR009001 | Homologous_superfamily | Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal | Interproscan |
| IPR004160 | Domain | Translation elongation factor EFTu/EF1A, C-terminal | Interproscan |
| IPR004161 | Domain | Translation elongation factor EFTu-like, domain 2 | Interproscan |
| IPR031157 | Conserved_site | Tr-type G domain, conserved site | Interproscan |
| IPR050100 | Family | Translation factor GTPase superfamily members | Interproscan |
| IPR009000 | Homologous_superfamily | Translation protein, beta-barrel domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR23115 | TRANSLATION FACTOR | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003924 | Molecular Function | GTPase activity | Interproscan |
| GO:0005525 | Molecular Function | GTP binding | Interproscan |
| GO:0003746 | Molecular Function | translation elongation factor activity | Interproscan |
| GO:0006414 | Biological Process | translational elongation | Interproscan |
| GO:0006412 | Biological Process | translation | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K03231 | EEF1A; elongation factor 1-alpha | - | Exosome | ko04147 | deepkoala |