Detailed information of gene08794.t1 in Actinoscyphia liui

Genomic Location: chr11:15456048...15470739
NR annotation: XP_032220713.2, harmonin-like isoform X2 [Nematostella vectensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9Y6N9Harmonin OS=Homo sapiens OX=9606 GN=USH1C PE=1 SV=3
Q3MHQ0Harmonin OS=Bos taurus OX=9913 GN=USH1C PE=2 SV=1
Q9ES64Harmonin OS=Mus musculus OX=10090 GN=Ush1c PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21219USH1C_NHarmonin, N-terminal domainDomainInterproscan
PF00595PDZPDZ domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036034Homologous_superfamilyPDZ superfamilyInterproscan
IPR030237DomainHarmonin, N-terminalInterproscan
IPR051844FamilySensory Perception USH2 Complex ProteinInterproscan
IPR001478DomainPDZ domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23116PDZ DOMAIN CONTAINING WHIRLIN AND HARMONIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0002142Cellular Componentstereocilia ankle link complexInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0005929Cellular ComponentciliumInterproscan
GO:0032426Cellular Componentstereocilium tipInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K21877USH1C; harmonin-Cilium and associated proteinsko03037deepkoala

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