Detailed information of gene08671.t1 in Actinoscyphia liui

Genomic Location: chr11:13448217...13453795
NR annotation: KXJ20912.1, Nuclear pore complex protein Nup50 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O08587Nuclear pore complex protein Nup50 OS=Rattus norvegicus OX=10116 GN=Nup50 PE=2 SV=2
Q9UKX7Nuclear pore complex protein Nup50 OS=Homo sapiens OX=9606 GN=NUP50 PE=1 SV=2
Q9JIH2Nuclear pore complex protein Nup50 OS=Mus musculus OX=10090 GN=Nup50 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08911NUP50NUP50 (Nucleoporin 50 kDa)DomainInterproscan
PF00638Ran_BP1RanBP1 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000156DomainRan binding domainInterproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR015007DomainNuclear pore complex, NUP2/50/61Interproscan
IPR045255FamilyRan binding protein RanBP1-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23138RAN BINDING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0046907Biological Processintracellular transportInterproscan
GO:0005643Cellular Componentnuclear poreInterproscan
GO:0006606Biological Processprotein import into nucleusInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14295NUP50, NPAP60; nuclear pore complex protein Nup50-Messenger RNA biogenesisko03019deepkoala

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