Detailed information of gene08418.t1 in Actinoscyphia liui

Genomic Location: chr11:8480323...8482146
NR annotation: XP_028512811.1, circadian locomoter output cycles protein kaput [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5ZQU2Neuronal PAS domain-containing protein 2 OS=Gallus gallus OX=9031 GN=NPAS2 PE=1 SV=1
Q6YGZ4Circadian locomoter output cycles protein kaput OS=Tyto alba OX=56313 GN=CLOCK PE=2 SV=1
Q8QGQ6Circadian locomoter output cycles protein kaput OS=Gallus gallus OX=9031 GN=CLOCK PE=1 SV=2
 Gene family
Gene familySubfamily
Transcription Factors FamilybHLH

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00010HLHHelix-loop-helix DNA-binding domainDomainInterproscan
PF00989PASPAS foldDomainInterproscan
PF14598PAS_11PAS domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR035965Homologous_superfamilyPAS domain superfamilyInterproscan
IPR036638Homologous_superfamilyHelix-loop-helix DNA-binding domain superfamilyInterproscan
IPR000014DomainPAS domainInterproscan
IPR011598DomainMyc-type, basic helix-loop-helix (bHLH) domainInterproscan
IPR001067FamilyNuclear translocatorInterproscan
IPR013767DomainPAS foldInterproscan
IPR047230FamilyCircadian locomoter output cycles protein kaput-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46055CIRCADIAN LOCOMOTER OUTPUT CYCLES PROTEIN KAPUTInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005667Cellular Componenttranscription regulator complexInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0032922Biological Processcircadian regulation of gene expressionInterproscan
GO:1990513Cellular ComponentCLOCK-BMAL transcription complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02223CLOCK, KAT13D; circadian locomoter output cycles kaput proteinEC:2.3.1.48
Chromosome and associated proteinsko03036deepkoala

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