Detailed information of gene08223.t1 in Actinoscyphia liui

Genomic Location: chr11:4493415...4494524
NR annotation: XP_020916353.2, uncharacterized protein LOC110253742 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
G5EDS1Paired box protein 6 homolog OS=Caenorhabditis elegans OX=6239 GN=vab-3 PE=1 SV=1
P47238Paired box protein Pax-6 OS=Coturnix japonica OX=93934 GN=PAX6 PE=2 SV=1
Q1LZF1Paired box protein Pax-6 OS=Bos taurus OX=9913 GN=PAX6 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00292PAX'Paired box' domainDomainInterproscan
PF13358DDE_3DDE superfamily endonucleaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR001523DomainPaired domainInterproscan
IPR038717DomainTc1-like transposase, DDE domainInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR043565FamilyPAX familyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45636PAIRED BOX PROTEIN PAX-6-RELATED-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0048856Biological Processanatomical structure developmentInterproscan

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