Detailed information of gene07642.t1 in Actinoscyphia liui

Genomic Location: chr2:50759875...50764820
NR annotation: XP_020914822.1, ribosome maturation protein SBDS-like [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6DIT8Ribosome maturation protein SBDS OS=Xenopus tropicalis OX=8364 GN=sbds PE=2 SV=1
A5D8M6Ribosome maturation protein SBDS OS=Xenopus laevis OX=8355 GN=sbds PE=2 SV=1
Q9Y3A5Ribosome maturation protein SBDS OS=Homo sapiens OX=9606 GN=SBDS PE=1 SV=4

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF20268SBDS_CSBDS protein, C-terminal domainDomainInterproscan
PF09377SBDS_domain_IISBDS protein, domain IIDomainInterproscan
PF01172SBDSShwachman-Bodian-Diamond syndrome (SBDS) protein FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002140FamilyRibosome maturation protein Sdo1/SBDSInterproscan
IPR037188Homologous_superfamilyRibosome maturation protein Sdo1/SBDS, central domain superfamilyInterproscan
IPR018023Conserved_siteRibosome maturation protein SBDS, conserved siteInterproscan
IPR039100FamilyRibosome maturation protein Sdo1/SBDS-likeInterproscan
IPR036786Homologous_superfamilyRibosome maturation protein SBDS, N-terminal domain superfamilyInterproscan
IPR046928DomainRibosome maturation protein SDO1/SBDS, C-terminal domainInterproscan
IPR018978DomainRibosome maturation protein SDO1/SBDS, central domainInterproscan
IPR019783DomainRibosome maturation protein SDO1/SBDS, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10927RIBOSOME MATURATION PROTEIN SBDSInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0042256Biological Processcytosolic ribosome assemblyInterproscan
GO:0042254Biological Processribosome biogenesisInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14574SDO1, SBDS; ribosome maturation protein SDO1-Ribosome biogenesisko03009deepkoala

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