Detailed information of gene07204.t1 in Actinoscyphia liui

Genomic Location: chr2:43584334...43607683
NR annotation: XP_028519248.1, mediator of RNA polymerase II transcription subunit 16 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q08D69Mediator of RNA polymerase II transcription subunit 16 OS=Xenopus tropicalis OX=8364 GN=med16 PE=2 SV=1
Q9Y2X0Mediator of RNA polymerase II transcription subunit 16 OS=Homo sapiens OX=9606 GN=MED16 PE=1 SV=2
Q6PGF3Mediator of RNA polymerase II transcription subunit 16 OS=Mus musculus OX=10090 GN=Med16 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF11635Med16_NMediator complex subunit 16, N-terminalRepeatInterproscan
PF20718Med16_bridgeMediator complex subunit 16, central helical bridgeDomainInterproscan
PF20719Med16_CMediator complex subunit 16, C-terminalDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR021665DomainMediator complex, subunit Med16, N-terminalInterproscan
IPR048338FamilyMediator complex, subunit Med16Interproscan
IPR048616DomainMediator of RNA polymerase II transcription subunit 16 , central helical bridgeInterproscan
IPR048339DomainMediator complex subunit 16, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13224THYROID HORMONE RECEPTOR-ASSOCIATED PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0016592Cellular Componentmediator complexInterproscan
GO:0045893Biological Processpositive regulation of DNA-templated transcriptionInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K15159MED16; mediator of RNA polymerase II transcription subunit 16-Transcription machineryko03021deepkoala

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