Detailed information of gene06731.t2 in Actinoscyphia liui

Genomic Location: chr2:37172298...37174541
NR annotation: XP_031558217.1, selenocysteine-specific elongation factor-like [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P57772Selenocysteine-specific elongation factor OS=Homo sapiens OX=9606 GN=EEFSEC PE=1 SV=4
Q9JHW4Selenocysteine-specific elongation factor OS=Mus musculus OX=10090 GN=Eefsec PE=1 SV=2
Q57918Selenocysteine-specific elongation factor OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=selB PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21208euk_SelB_IIISelenocysteine-specific elongation factor, eukaryotes, 3rd domainDomainInterproscan
PF00009GTP_EFTUElongation factor Tu GTP binding domainDomainInterproscan
PF21131eEFSec_4theEFSec C-terminal RIFT domainDomainInterproscan
PF03144GTP_EFTU_D2Elongation factor Tu domain 2DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR049393DomainSelenocysteine-specific elongation factor, 3rd domainInterproscan
IPR050055FamilyElongation factor Tu GTPaseInterproscan
IPR000795DomainTranslational (tr)-type GTP-binding domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR009000Homologous_superfamilyTranslation protein, beta-barrel domain superfamilyInterproscan
IPR049394DomainSelenocysteine-specific elongation factor, C-terminal RIFT domainInterproscan
IPR004161DomainTranslation elongation factor EFTu-like, domain 2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43721ELONGATION FACTOR TU-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0001514Biological Processselenocysteine incorporationInterproscan
GO:0003746Molecular Functiontranslation elongation factor activityInterproscan
GO:0006414Biological Processtranslational elongationInterproscan
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03833selB, EEFSEC; selenocysteine-specific elongation factor-Translation factorsko03012deepkoala

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