Detailed information of gene06727.t1 in Actinoscyphia liui

Genomic Location: chr2:37135615...37151690
NR annotation: XP_020902878.1, lysine-specific demethylase 2A [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q640I9Lysine-specific demethylase 2B OS=Xenopus laevis OX=8355 GN=kdm2b PE=2 SV=1
Q5U263Lysine-specific demethylase 2A OS=Xenopus tropicalis OX=8364 GN=kdm2a PE=2 SV=1
Q9Y2K7Lysine-specific demethylase 2A OS=Homo sapiens OX=9606 GN=KDM2A PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02008zf-CXXCCXXC zinc finger domainDomainInterproscan
PF12937F-box-likeF-box-likeDomainInterproscan
PF16866PHD_4PHD-fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR050690FamilyJHDM1 Histone DemethylaseInterproscan
IPR002857DomainZinc finger, CXXC-typeInterproscan
IPR006553RepeatLeucine-rich repeat, cysteine-containing subtypeInterproscan
IPR019787DomainZinc finger, PHD-fingerInterproscan
IPR001810DomainF-box domainInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23123PHD/F-BOX CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003712Molecular Functiontranscription coregulator activityInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0006482Biological Processprotein demethylationInterproscan
GO:0032452Molecular Functionhistone demethylase activityInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

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