Detailed information of gene06170.t1 in Actinoscyphia liui

Genomic Location: chr2:31054188...31105770
NR annotation: KXJ27544.1, CAD protein [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q91437Multifunctional protein CAD OS=Squalus acanthias OX=7797 GN=CAD PE=2 SV=1
B2RQC6Multifunctional protein CAD OS=Mus musculus OX=10090 GN=Cad PE=1 SV=1
P27708Multifunctional protein CAD OS=Homo sapiens OX=9606 GN=CAD PE=1 SV=3
 Gene family
Gene familySubfamily
Transcription Factors Familyzf-C2HC

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02729OTCace_NAspartate/ornithine carbamoyltransferase, carbamoyl-P binding domainDomainInterproscan
PF01979Amidohydro_1Amidohydrolase familyDomainInterproscan
PF01530zf-C2HCZinc finger, C2HC typeFamilyInterproscan
PF00117GATaseGlutamine amidotransferase class-IDomainInterproscan
PF02786CPSase_L_D2Carbamoyl-phosphate synthase L chain, ATP binding domainDomainInterproscan
PF02536mTERFmTERFFamilyInterproscan
PF00536SAM_1SAM domain (Sterile alpha motif)DomainInterproscan
PF00185OTCaceAspartate/ornithine carbamoyltransferase, Asp/Orn binding domainDomainInterproscan
PF02787CPSase_L_D3Carbamoyl-phosphate synthetase large chain, oligomerisation domainDomainInterproscan
PF02142MGSMGS-like domainDomainInterproscan
PF00988CPSase_sm_chainCarbamoyl-phosphate synthase small chain, CPSase domainDomainInterproscan
PF02820MBTmbt repeatDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002082FamilyAspartate carbamoyltransferaseInterproscan
IPR002195Conserved_siteDihydroorotase, conserved siteInterproscan
IPR036901Homologous_superfamilyAspartate/ornithine carbamoyltransferase superfamilyInterproscan
IPR016185Homologous_superfamilyPre-ATP-grasp domain superfamilyInterproscan
IPR005483DomainCarbamoyl-phosphate synthase large subunit, CPSase domainInterproscan
IPR006132DomainAspartate/ornithine carbamoyltransferase, carbamoyl-P bindingInterproscan
IPR011761DomainATP-grasp foldInterproscan
IPR036897Homologous_superfamilyCarbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamilyInterproscan
IPR011607DomainMethylglyoxal synthase-like domainInterproscan
IPR006680DomainAmidohydrolase-relatedInterproscan
IPR002515RepeatZinc finger, C2H2C-typeInterproscan
IPR006130FamilyAspartate/ornithine carbamoyltransferaseInterproscan
IPR001660DomainSterile alpha motif domainInterproscan
IPR017926DomainGlutamine amidotransferaseInterproscan
IPR002474DomainCarbamoyl-phosphate synthase small subunit, N-terminal domainInterproscan
IPR038603Homologous_superfamilyFCS-type zinc finger superfamilyInterproscan
IPR005479DomainCarbamoyl-phosphate synthetase large subunit-like, ATP-binding domainInterproscan
IPR006275FamilyCarbamoyl-phosphate synthase, large subunitInterproscan
IPR005480DomainCarbamoyl-phosphate synthetase, large subunit oligomerisation domainInterproscan
IPR013761Homologous_superfamilySterile alpha motif/pointed domain superfamilyInterproscan
IPR003690FamilyTranscription termination factor, mitochondrial/chloroplasticInterproscan
IPR036060Homologous_superfamilyZinc finger, C2H2C-type superfamilyInterproscan
IPR004092RepeatMbt repeatInterproscan
IPR029062Homologous_superfamilyClass I glutamine amidotransferase-likeInterproscan
IPR036480Homologous_superfamilyCarbamoyl-phosphate synthase small subunit, N-terminal domain superfamilyInterproscan
IPR035686DomainCarbamoyl-phosphate synthase small subunit, GATase1 domainInterproscan
IPR036914Homologous_superfamilyMethylglyoxal synthase-like domain superfamilyInterproscan
IPR006131DomainAspartate/ornithine carbamoyltransferase, Asp/Orn-binding domainInterproscan
IPR032466Homologous_superfamilyMetal-dependent hydrolaseInterproscan
IPR013815Homologous_superfamilyATP-grasp fold, subdomain 1Interproscan
IPR011059Homologous_superfamilyMetal-dependent hydrolase, composite domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11405CARBAMOYLTRANSFERASE FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004070Molecular Functionaspartate carbamoyltransferase activityInterproscan
GO:0006207Biological Process'de novo' pyrimidine nucleobase biosynthetic processInterproscan
GO:0016812Molecular Functionhydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidesInterproscan
GO:0006520Biological Processamino acid metabolic processInterproscan
GO:0016597Molecular Functionamino acid bindingInterproscan
GO:0016743Molecular Functioncarboxyl- or carbamoyltransferase activityInterproscan
GO:0006807Biological Processobsolete nitrogen compound metabolic processInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0016787Molecular Functionhydrolase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003690Molecular Functiondouble-stranded DNA bindingInterproscan
GO:0004088Molecular Functioncarbamoyl-phosphate synthase (glutamine-hydrolyzing) activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005951Cellular Componentcarbamoyl-phosphate synthase complexInterproscan
GO:0006526Biological ProcessL-arginine biosynthetic processInterproscan
GO:0016810Molecular Functionhydrolase activity, acting on carbon-nitrogen (but not peptide) bondsInterproscan

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