Detailed information of gene06161.t3 in Actinoscyphia liui

Genomic Location: chr2:30914268...31031887
NR annotation: XP_048581984.1, uncharacterized protein LOC5509225 isoform X1 [Nematostella vectensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9QXZ0Microtubule-actin cross-linking factor 1, isoforms 1/2/3/4 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2
Q91ZU6Dystonin OS=Mus musculus OX=10090 GN=Dst PE=1 SV=2
Q9UPN3Microtubule-actin cross-linking factor 1, isoforms 1/2/3/4/5 OS=Homo sapiens OX=9606 GN=MACF1 PE=1 SV=4

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17902SH3_10SH3 domainDomainInterproscan
PF02187GAS2Growth-Arrest-Specific Protein 2 DomainFamilyInterproscan
PF00435SpectrinSpectrin repeatDomainInterproscan
PF00307CHCalponin homology (CH) domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR041615DomainDesmoplakin, SH3 domainInterproscan
IPR001715DomainCalponin homology domainInterproscan
IPR002048DomainEF-hand domainInterproscan
IPR003108DomainGAR domainInterproscan
IPR043197FamilyPlakinInterproscan
IPR018159RepeatSpectrin/alpha-actininInterproscan
IPR036872Homologous_superfamilyCH domain superfamilyInterproscan
IPR002017RepeatSpectrin repeatInterproscan
IPR001589Conserved_siteActinin-type actin-binding domain, conserved siteInterproscan
IPR036534Homologous_superfamilyGAR domain superfamilyInterproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23169ENVOPLAKINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0008017Molecular Functionmicrotubule bindingInterproscan
GO:0005198Molecular Functionstructural molecule activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005882Cellular Componentintermediate filamentInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0042060Biological Processwound healingInterproscan
GO:0045104Biological Processintermediate filament cytoskeleton organizationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10382DST; dystonin-Cytoskeleton proteinsko04812deepkoala

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