Detailed information of gene05845.t1 in Actinoscyphia liui

Genomic Location: chr2:27571951...27579663
NR annotation: XP_020901983.1, histidine--tRNA ligase, cytoplasmic isoform X1 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
E9QI36Histidine--tRNA ligase OS=Danio rerio OX=7955 GN=hars PE=3 SV=2
Q2KI84Histidine--tRNA ligase, cytoplasmic OS=Bos taurus OX=9913 GN=HARS1 PE=2 SV=1
Q61035Histidine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Hars1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03129HGTP_anticodonAnticodon binding domainDomainInterproscan
PF13393tRNA-synt_HisHistidyl-tRNA synthetaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015807FamilyHistidine-tRNA ligaseInterproscan
IPR000738DomainWHEP-TRS domainInterproscan
IPR045864Homologous_superfamilyClass II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)Interproscan
IPR009068Homologous_superfamilyuS15/NS1, RNA-binding domain superfamilyInterproscan
IPR036621Homologous_superfamilyAnticodon-binding domain superfamilyInterproscan
IPR006195DomainAminoacyl-tRNA synthetase, class IIInterproscan
IPR004154DomainAnticodon-bindingInterproscan
IPR041715DomainClass II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domainInterproscan
IPR033656DomainHistidyl-anticodon-bindingInterproscan
IPR004516FamilyHistidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunitInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11476HISTIDYL-TRNA SYNTHETASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004821Molecular Functionhistidine-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006427Biological Processhistidyl-tRNA aminoacylationInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0006418Biological ProcesstRNA aminoacylation for protein translationInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0032543Biological Processmitochondrial translationInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01892HARS, hisS; histidyl-tRNA synthetaseEC:6.1.1.21
Transfer RNA biogenesisko03016deepkoala

TOP