Detailed information of gene05751.t1 in Actinoscyphia liui

Genomic Location: chr2:26469046...26483009
NR annotation: XP_020917747.2, tRNA pseudouridine(38/39) synthase [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9BZE2tRNA pseudouridine(38/39) synthase OS=Homo sapiens OX=9606 GN=PUS3 PE=1 SV=3
Q9JI38tRNA pseudouridine(38/39) synthase OS=Mus musculus OX=10090 GN=Pus3 PE=1 SV=2
Q3SX07tRNA pseudouridine(38/39) synthase OS=Bos taurus OX=9913 GN=PUS3 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01416PseudoU_synth_1tRNA pseudouridine synthaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR041707FamilyPseudouridine synthase Pus3-likeInterproscan
IPR001406FamilyPseudouridine synthase I, TruAInterproscan
IPR020097DomainPseudouridine synthase I, TruA, alpha/beta domainInterproscan
IPR020094Homologous_superfamilyPseudouridine synthase TruA/RsuA/RluB/E/F, N-terminalInterproscan
IPR020095Homologous_superfamilyPseudouridine synthase I, TruA, C-terminalInterproscan
IPR020103Homologous_superfamilyPseudouridine synthase, catalytic domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11142PSEUDOURIDYLATE SYNTHASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0001522Biological Processpseudouridine synthesisInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0009451Biological ProcessRNA modificationInterproscan
GO:0009982Molecular Functionpseudouridine synthase activityInterproscan
GO:0031119Biological ProcesstRNA pseudouridine synthesisInterproscan
GO:1990481Biological ProcessmRNA pseudouridine synthesisInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01855PUS3, DEG1; tRNA pseudouridine38/39 synthaseEC:5.4.99.45
Transfer RNA biogenesisko03016deepkoala

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