Detailed information of gene05352.t1 in Actinoscyphia liui

Genomic Location: chr2:21130126...21142778
NR annotation: KXJ22463.1, Neuronal PAS domain-containing protein 2 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9I8T7Basic helix-loop-helix ARNT-like protein 1 OS=Gallus gallus OX=9031 GN=BMAL1 PE=1 SV=1
Q6YGZ5Basic helix-loop-helix ARNT-like protein 1 OS=Tyto alba OX=56313 GN=BMAL1 PE=2 SV=1
Q9EPW1Basic helix-loop-helix ARNT-like protein 1 OS=Rattus norvegicus OX=10116 GN=Bmal1 PE=2 SV=4
 Gene family
Gene familySubfamily
Transcription Factors FamilybHLH

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00010HLHHelix-loop-helix DNA-binding domainDomainInterproscan
PF00989PASPAS foldDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000014DomainPAS domainInterproscan
IPR050933FamilyCircadian Clock Transcription FactorsInterproscan
IPR001067FamilyNuclear translocatorInterproscan
IPR036638Homologous_superfamilyHelix-loop-helix DNA-binding domain superfamilyInterproscan
IPR011598DomainMyc-type, basic helix-loop-helix (bHLH) domainInterproscan
IPR013767DomainPAS foldInterproscan
IPR035965Homologous_superfamilyPAS domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23042CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PASInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0034751Cellular Componentaryl hydrocarbon receptor complexInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0005667Cellular Componenttranscription regulator complexInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan

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