Detailed information of gene05306.t1 in Actinoscyphia liui

Genomic Location: chr2:20445054...20451866
NR annotation: XP_020905207.1, uncharacterized protein LOC110243446 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q1XH18Tripartite motif-containing protein 72 OS=Oryctolagus cuniculus OX=9986 GN=TRIM72 PE=1 SV=1
Q1XH17Tripartite motif-containing protein 72 OS=Mus musculus OX=10090 GN=Trim72 PE=1 SV=1
A0JPQ4Tripartite motif-containing protein 72 OS=Rattus norvegicus OX=10116 GN=Trim72 PE=1 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|ZnF|NZF

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00643zf-B_boxB-box zinc fingerDomainInterproscan
PF13445zf-RING_UBOXRING-type zinc-fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000315DomainB-box-type zinc fingerInterproscan
IPR001876DomainZinc finger, RanBP2-typeInterproscan
IPR050143FamilyTripartite motif-containingInterproscan
IPR027370DomainZinc finger, RING-type, eukaryoticInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24103E3 UBIQUITIN-PROTEIN LIGASE TRIMInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan

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