Detailed information of gene05139.t1 in Actinoscyphia liui

Genomic Location: chr2:18069814...18079504
NR annotation: XP_031552383.1, arginine--tRNA ligase, cytoplasmic-like [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6P1S4Arginine--tRNA ligase, cytoplasmic OS=Xenopus tropicalis OX=8364 GN=rars1 PE=2 SV=1
Q9D0I9Arginine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Rars1 PE=1 SV=2
A7YW98Arginine--tRNA ligase, cytoplasmic OS=Bos taurus OX=9913 GN=RARS1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00750tRNA-synt_1dtRNA synthetases class I (R)FamilyInterproscan
PF03485Arg_tRNA_synt_NArginyl tRNA synthetase N terminal domainDomainInterproscan
PF05746DALR_1DALR anticodon binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001278FamilyArginine-tRNA ligaseInterproscan
IPR014729Homologous_superfamilyRossmann-like alpha/beta/alpha sandwich foldInterproscan
IPR009080Homologous_superfamilyAminoacyl-tRNA synthetase, class Ia, anticodon-bindingInterproscan
IPR001412Conserved_siteAminoacyl-tRNA synthetase, class I, conserved siteInterproscan
IPR035684DomainArginyl-tRNA synthetase, catalytic core domainInterproscan
IPR036695Homologous_superfamilyArginyl tRNA synthetase N-terminal domain superfamilyInterproscan
IPR005148DomainArginyl tRNA synthetase N-terminal domainInterproscan
IPR008909DomainDALR anticodon bindingInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11956ARGINYL-TRNA SYNTHETASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004814Molecular Functionarginine-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006420Biological Processarginyl-tRNA aminoacylationInterproscan
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0006418Biological ProcesstRNA aminoacylation for protein translationInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01887RARS, argS; arginyl-tRNA synthetaseEC:6.1.1.19
Mitochondrial biogenesisko03029deepkoala

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