Gene detail

Detailed information of gene05019.t1 in Actinoscyphia liui

Genomic Location: chr2:15720626...15743408
NR annotation: XP_020910091.1, proton-coupled amino acid transporter 1 [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

gene05019.t1

TATCTTCCCTCAATAGCTTAGTAAGCGCTTTTCCTCGCTCATAAAAATATATATAGCTAGAGGAGCGAGCATCAATTGTTTGAATCATCCAATCAGATCTAGAATTCATTAATGCTTTGAATACTTCAAGAGTTTTCGTTTTAATTAACAGAGATCAGACCGAAAATCTACAACTCATTTTTCGAATAACGCAAACATATCAATGGAGCCTAGAGGGATCCGCTTGAGCCTTTTTCCGAGTAAAGACTCTATAAATAATGAAAATAATGGCTTATTAGACGAAAGGTATTCCCTGGTCGCTAATCACAAGTCAAAAATGAGCCTTCTTGCTGGTACTTCAACGAGTGACATGGATCGCAGCTTGTATATGGAGAATACAGTAACGTGGTACTCGGCATTGGTGCATGTTATCAAGGGTAGTCTAGCAGTAGGTGCTCTGGGTCTACCGTTTGCCGTGATGCATGCAGGCATTGTGGTTGGTCCTCTTTTGATCATTCTGTCTGGGGTTATTATGGCACACTGTATGCACTTAATGGTACGGAGCAGCCATTTCTTTTGTGATAGAAGTGAAAATATTTCCCTTGGCTATGCAGAAGTAGCTGAAATGGCTGTTGGTCTGTATTATGAAAACAAGAAGCACATAGGCAGTTTGGTTGTGAAAATTGTCCTTGTCATGACTCAGATTGGATTTTGCTGTGTTTACATCCTTTTTGTTGCTGAAACGTTTCAACAGATCTTAAACAAGTATGTGTATCTGGACATCAAACTTTGGGTGGCTATCATTCTGGTTCCTATCATTCTGCTTTCCTTTATCCACACCTTAAAGGTCATGGCAGTACTATCAGCTATTTCCAATGTGCTGTACATTTCTGGTATCATTTATCTGTTGGTCTATGCAGGAAGCACTGCACACAACCCTGCCACATTACCAACATTTGTTGGTTTTGGTACGCTTCCATTGGCATTTTCCAATATTGTGTTTTCAGTTGAATCAATTGCACTGGTTCTTCCAGTGGAGAACATGATGGCACTGCCTCAAAACTTCTACTGTGTTCTTAGAGGTGGCATGGTTATTGTTATAGTCATCTCAGTTCTTGTAGGCACTTTGGGATATTTGTCTTGTGGCAATCAGTGTCTTGGTAGTTTTACACTCAATTTTCCCAACACAGTGTTTGGAGTAACTGTGAAGCTCATGCTTGCCATTGCAGTTTTGTTCACATATTTCATCCAATTCTATGTGCTAATGGAGATTATCATCCCACCATTGCAAGAAAAAATAGCAGCCAAGTACCACACCCTTGTGGATTATGGAACTCGGACCCTTATGGTGTGTTGTACTGGAATTCTATCTCTTGGAATACCTCAACTTGGAAACATGATTTCTCTGTCTGGATCACTAGGATGTATATCGTTGGCAATCACATTTCCACCAGCAATACACATTGCAACTCTTTATCATGACAAAACACTCACTACATTTTCTTTGGTCAAAGACATTATACTCATCTGCTTTGGAATCCTGGGAACAGTAGCTGGTCTTTATGCATCTCTGGTGACTATTATTTGGACATTTGAGCATCCCAGCAAACATATAAGCCACCATGGACAGACTGCCAATTCAACATTATAATAATCGTACATGTGGACAGTAAAGATTAAAGTTGTTAGTTAACAAGTAAAAAAGTTATATATGCAATTTGCAGGGCTTCAAGTTGCCTCCTACTAAAATAAAGGGCTAATATAGGGAAGAAGAAGAAAAATTTATAGGGACAATATAGGGATTTTTTAAATTATTGACAACAGATAAACAGCAAAAATAAATGTTTATTGCCTTAAAAGTCGGAATTTTTTACATGCAACATAATGAATAAACTGATACAAGTAATGGCCTCCTCCATCACCTTCACAGCCATTTTTATAACCATCGCACAAGAAACCACAATTTAATTTATATAGTTGCAAACAAAATTCTCTAAATTATTTTACATGAGGTTCTTGCCACACACAAAAATAGTGGACTTTTAATTTCAACATGAACTCTTACATTTACCGTCCTGCTGTATGTACCATCCAGGATTACAATAAATGACTACACCAT

Protein

Uniprot

Uniprot term	Description
Q924A5	Proton-coupled amino acid transporter 1 OS=Rattus norvegicus OX=10116 GN=Slc36a1 PE=1 SV=1
Q8BHK3	Proton-coupled amino acid transporter 2 OS=Mus musculus OX=10090 GN=Slc36a2 PE=1 SV=1
Q8K4D3	Proton-coupled amino acid transporter 1 OS=Mus musculus OX=10090 GN=Slc36a1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01490	Aa_trans	Transmembrane amino acid transporter protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013057	Domain	Amino acid transporter, transmembrane domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22950	AMINO ACID TRANSPORTER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003333	Biological Process	amino acid transmembrane transport	Interproscan
GO:0015179	Molecular Function	L-amino acid transmembrane transporter activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K14209	SLC36A, PAT; solute carrier family 36 (proton-coupled amino acid transporter)	-	Transporters	ko02000	deepkoala