Gene detail

Detailed information of gene04154.t2 in Actinoscyphia liui Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
gene04154.t2	DNA POLYMERASE	chr1	68035460	68038299	-

Gene Structure

More details in Jbrowse Sequence

CDS

gene04154.t2

ATGAACACAAAATCCGTCAAAGAATTGAAAACCCTCGCCAAAGAGCGCGGAATCAAAGGATATTACCGACTGCGTAAAGCGGAACTTATCGACGTCTTGGGACTTGAGACACAAACAATTAAACCTGAAATCAAATTGAACGAACCGGTTACTCCTGAAAAGCTCAAAGAACCGATTCAAAACACCACCCCACCAGTTCAACCCGCACTTCATAGTTTTTCCAAGATGGCAACAAATTCGTTTTATAAAGCGATCAACGATTTTTCAGACTGGATATATTCATATATTCCAGAACCCATCAAGAAAACCGTAAATAAACACATCAACACGTTGAAGAGTAAAATTAATAAACTTTTTGACCGCTCAAGTGTGAAAAGTGAACCAAAACCAGTGGTGCCAGAATACAAAATTCATAAAGAAGGAGAAAGGTCAAACAAGAAATTCAGTACATATTTTGATAGATATCGTATTGAAATGAAGGAAAACGTCTCAACTATTGATATCATGAAAGTGTTCTTAGAAATACTAAATAAAGCAATAGAAGAACGCGGGTTAGTTAACGGTGACAAAATTCGTTTAATTTTGAGCCATTCCCGATGGTCAAAAACGTTTAGCACAAAATTAATGACCATAAACGGTGATCTTCCCTCATCATTTGTAGAAGAATGTGCCAAATTTGTAGAATACAAAGAGGTGCCCATAGAGGAGTTGGAAATTGATGTTCAATCTACAAAGATTCCTAGAGGAAAGGGAAGACTTCAGGTAACCAAAAATACTATTCGTAATAAAAAGTCAGTTATCACAATCAAGAATTCAGATTCCATTTGTCTTGCCAGAGCAATTGTTACTGCCCACGCAAATTTAAACAAGGATAAATGGACGAAATCAAATATTAAAAACGATTTCAATCAATCTAGACGACTTCAAGGAGAAATGGCTGTAAAATTACATGACGATGCAGGTGTTGAAATGAATGAGTTAGGGAGTTCTCTTGAAGACGTGAAAACCTTTGCAAAACACCTTGGTATTCAGATTAATATTGTAGATGCTGATCAGTTTAACGAAATTATCTTCACCTCTGATAGCGATTATGACTCATCTCAGATGATTTATTTATTCAAGAATAAAAATCACTTTGATGTTATAACGAGCATGCCCGGATTCTTATGTAAAGATTACTTTTGCCATACCTGTAAGAAATCGTATACTCGTCGTGATATGCATAGGTATCCTGCCAAATGCATAGCGTGTTACAAATACTTTCCAGAAGGCGATAAATGTTCTGGTGAACAGATCACGTGCTACGATTGTAACCGAACATTTTTTGGTCAAAACTGTTTCGATGAACATAAACGTAACCGAGCTAAAAAGGAAGGTAACACAAATATCGTTTGTGAAATCATTTTCAAATGTTTAAAATGTGAGAGAACACTAACGTCCGATAAAGATGTGAACATTAAAAATCATTCTTGCGGTTTCAGTAAATGCTCCAACTGTAAAATTTATTGTGATTTGACTCTACATCAGTGCCACATGAAAAAGACAATCTGCAAGGGTGGATATTGTATGAAAGTGTCAAATTGTGAAGAGTTAACTAAAATTAATAAAAAGCATAAAAAGTGTTATCAATGTAAAACATTCACTGAAAAATACATGTTCTTCGATTTTGAGTGTAATCAAGAAACAGGTGTTCACGAGGTCAACCTTGCTGTTGTGCAAGACTTTGAAGGAAATGAATGGGTATTCAAAAATTCCACAGAATTTTGTAACTTTGTATTCTCTGATGAAAATAAGAATTACACGCTAATTGCACATAATGCAAAGGGTTACGACGCACAATTTATCTTGAAGTGGTGTGTAGAAAATAGCATCAAACCTTACTGCATCTACGCAGGTACAAAAATTATGTCAATGGAAATAACAAAGTTTGGAATTCGAATCATAGATTCGTTAAACTTTGTTCAAAGTCGATTAAAAGACTTTCCCAAGACATTTGGTTTTACAGAACTTAAAAAGGGTTACTTTCCCCACTTTTTCAATAAAGAGTGTCACCAGAATTACGTAGGACCATTACCAGCAAAAATGCACTTTGGATTCGATCAAATGAATACCAAAGATAGAAAAGTCTTCCAAGCATGGCATGATGCATGTGTAAAGGAAAATTACGTATTCGACTTTCAGAAAGAAATTCTAGAGTATTGTCGATCAGATGTTGATATTTTGAGGCGTAGTATGTTGAAGTTTAGAAAAGACTTTATAAAACTTGAAAACATTGATCTATTACAGTACATTACGATTGCCAGTGTTTGCATGACTATCTACAGAAGTAACTACATGCCAAAAGATTCCATTGCAGTCGTAAAAGACACCACACGCGGTGAAAATTATAGTAAGATTAGTATTGCGTGGTCAGATTGGATAGAAGAAAAACACCGTATTAAAATTCAACACGCTCTAAATGGAGGTCGAGAAGGGTAG

Transcript

gene04154.t2

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03175	DNA_pol_B_2	DNA polymerase type B, organellar and viral	Family	Interproscan
PF07498	Rho_N	Rho termination factor, N-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004868	Domain	DNA-directed DNA polymerase, family B, mitochondria/virus	Interproscan
IPR011112	Domain	Rho termination factor, N-terminal	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR33568	DNA POLYMERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000166	Molecular Function	nucleotide binding	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0003887	Molecular Function	DNA-directed DNA polymerase activity	Interproscan
GO:0006260	Biological Process	DNA replication	Interproscan
GO:0006353	Biological Process	DNA-templated transcription termination	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-