Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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Genomic Location: chr1:54226794...54234896
NR annotation: XP_020916134.1, DNA repair protein complementing XP-A cells homolog [Exaiptasia diaphana]
| CDS | |
| gene03472.t1 | |
| Transcript |
| gene03472.t1 |
| Protein |
| gene03472.t1 |
| Uniprot term | Description |
|---|---|
| P27088 | DNA repair protein complementing XP-A cells homolog OS=Xenopus laevis OX=8355 GN=xpa PE=2 SV=1 |
| Q64267 | DNA repair protein complementing XP-A cells homolog OS=Mus musculus OX=10090 GN=Xpa PE=1 SV=2 |
| P27089 | DNA repair protein complementing XP-A cells homolog OS=Gallus gallus OX=9031 GN=XPA PE=2 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF05181 | XPA_C | XPA protein C-terminus | Domain | Interproscan |
| PF01286 | XPA_N | XPA protein N-terminal | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR022656 | Domain | XPA, C-terminal | Interproscan |
| IPR037129 | Homologous_superfamily | XPA domain superfamily | Interproscan |
| IPR009061 | Homologous_superfamily | Putative DNA-binding domain superfamily | Interproscan |
| IPR022652 | Conserved_site | Zinc finger, XPA-type, conserved site | Interproscan |
| IPR000465 | Family | XPA/RAD14 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10142 | DNA REPAIR PROTEIN COMPLEMENTING XP-A CELLS | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003684 | Molecular Function | damaged DNA binding | Interproscan |
| GO:0006289 | Biological Process | nucleotide-excision repair | Interproscan |
| GO:0000110 | Cellular Component | nucleotide-excision repair factor 1 complex | Interproscan |
| GO:0000715 | Biological Process | nucleotide-excision repair, DNA damage recognition | Interproscan |
| GO:0006284 | Biological Process | base-excision repair | Interproscan |
| GO:0033683 | Biological Process | obsolete nucleotide-excision repair, DNA incision | Interproscan |
| GO:0070914 | Biological Process | UV-damage excision repair | Interproscan |
| GO:1901255 | Biological Process | nucleotide-excision repair involved in interstrand cross-link repair | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K10847 | XPA; DNA-repair protein complementing XP-A cells | - | DNA repair and recombination proteins | ko03400 | deepkoala |