Detailed information of gene02592.t1 in Actinoscyphia liui

Genomic Location: chr1:38964573...38974213
NR annotation: XP_020915566.1, paraplegin [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q7TT47Mitochondrial inner membrane m-AAA protease component paraplegin OS=Rattus norvegicus OX=10116 GN=Spg7 PE=2 SV=2
Q9UQ90Mitochondrial inner membrane m-AAA protease component paraplegin OS=Homo sapiens OX=9606 GN=SPG7 PE=1 SV=2
Q3ULF4Mitochondrial inner membrane m-AAA protease component paraplegin OS=Mus musculus OX=10090 GN=Spg7 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00004AAAATPase family associated with various cellular activities (AAA)DomainInterproscan
PF01434Peptidase_M41Peptidase family M41DomainInterproscan
PF06480FtsH_extFtsH ExtracellularFamilyInterproscan
PF17862AAA_lid_3AAA+ lid domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003959DomainATPase, AAA-type, coreInterproscan
IPR050928FamilyATP-dependent Zinc MetalloproteaseInterproscan
IPR003593DomainAAA+ ATPase domainInterproscan
IPR037219Homologous_superfamilyPeptidase M41-likeInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR005936FamilyATP-dependent zinc metalloprotease, FtsHInterproscan
IPR000642DomainPeptidase M41Interproscan
IPR011546DomainPeptidase M41, FtsH extracellularInterproscan
IPR041569DomainAAA ATPase, AAA+ lid domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43655ATP-DEPENDENT PROTEASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0005745Cellular Componentm-AAA complexInterproscan
GO:0034982Biological Processmitochondrial protein processingInterproscan
GO:0004176Molecular FunctionATP-dependent peptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K09552SPG7; spastic paraplegia 7EC:3.4.24.-
Chaperones and folding catalystsko03110deepkoala

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