Detailed information of gene02192.t1 in Actinoscyphia liui

Genomic Location: chr1:34123226...34124751
NR annotation: EDO48286.1, predicted protein [Nematostella vectensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P15870Histone H1-delta OS=Strongylocentrotus purpuratus OX=7668 PE=3 SV=1
Q6NVM0Histone H1.0 OS=Xenopus tropicalis OX=8364 GN=h1-0 PE=2 SV=1
P06513Histone H5 OS=Cairina moschata OX=8855 PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00538Linker_histonelinker histone H1 and H5 familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR005818DomainLinker histone H1/H5, domain H15Interproscan
IPR005819FamilyLinker histone H1/H5Interproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11467HISTONE H1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000786Cellular ComponentnucleosomeInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006334Biological Processnucleosome assemblyInterproscan
GO:0003690Molecular Functiondouble-stranded DNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0030261Biological Processchromosome condensationInterproscan
GO:0031492Molecular Functionnucleosomal DNA bindingInterproscan
GO:0045910Biological Processnegative regulation of DNA recombinationInterproscan
GO:0030527Molecular Functionstructural constituent of chromatinInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11275H1_5; histone H1/5-Chromosome and associated proteinsko03036deepkoala

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