Detailed information of gene02142.t1 in Actinoscyphia liui

Genomic Location: chr1:33446828...33454451
NR annotation: XP_020894357.1, beta-1-syntrophin [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q13884Beta-1-syntrophin OS=Homo sapiens OX=9606 GN=SNTB1 PE=1 SV=3
Q99L88Beta-1-syntrophin OS=Mus musculus OX=10090 GN=Sntb1 PE=1 SV=4
Q13425Beta-2-syntrophin OS=Homo sapiens OX=9606 GN=SNTB2 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00169PHPH domainDomainInterproscan
PF18012PH_17PH domainDomainInterproscan
PF00595PDZPDZ domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001478DomainPDZ domainInterproscan
IPR001849DomainPleckstrin homology domainInterproscan
IPR041428DomainSyntrophin, split Pleckstrin homology (PH) domainInterproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR036034Homologous_superfamilyPDZ superfamilyInterproscan
IPR015482FamilySyntrophinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10554SYNTROPHINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005198Molecular Functionstructural molecule activityInterproscan
GO:0005622Cellular Componentintracellular anatomical structureInterproscan
GO:0016010Cellular Componentdystrophin-associated glycoprotein complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K24064SNTB; beta-syntrophin-Viral myocarditisko05416deepkoala

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