Gene detail

Detailed information of gene02096.t1 in Actinoscyphia liui

Genomic Location: chr1:32765546...32776160
NR annotation: XP_020893284.1, V-type proton ATPase subunit d 1 [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

gene02096.t1

GGCCGAGACGACGATGATGGCATTTGATGAGCTTTTCTTCAACCTGGATTCAGGATATCTTGAAGGACTTGTACGAGGCTTTAGGTCTGGTGTACTAACGCAAAGTGATTACTTGAACTTGGCTCAATGCGAAACTCTGGAGGATTTAAAGCTTCACTTACAGAGCACAGACTATGGCAACTTCTTACAGAATGAAGCGAGTCCATTGGCAGTGTCAGTTATTGATGACAAGTTAAGAGAACGATTGGTTGAGGAGTTCAAACATCTCAGAAACCAAGCACTTGAACCATTAGCAACATTTATGGACTATATAACATACAGCTACATGATTGATAATATCATATTATTAATCACTGGAACACTACACCAGAGGCCAATCCAAGAGCTGATCCCCAAATGTCACCCACTAGGGAGCTTTGAGGAAATGGCATCTATAAATATTGCATCTACTCCTGCCGACCTGTATAATGCCGTCATGATAGACACACCTCTTGCTCCTTTCTTTGTGGAGTGCATATCTGAACAAGATCTTGATGAGATGAATATTGAAATTATCAGGAATACACTATACAAGGCATATTTGGAAAGCTTTTACAAGTTTTGTGAAAGCCTTGGTGGGACAACAGCTGATGTTATGTGCCCTATTTTAAAGTTTGAAGCTGATAGGAGGGCGATAATCATCACAATCAACTCTTTTGGTACAGAGCTTAGCAAAGATGAAAGACAAAAGCTGTTTCCACAGTGTGGTAATCTTTATCCTTATGGACTTGCCAGGCTGTCTAAGGCAGACGAGTATGACCAAGTGCGTGCCGTCGCTGATTTCTACCCAGATTACCGGCAACTTTTTGATGGTGCTGGAACTGGTGCTGGTGAAAAGACACTAGAGGACAAGTTTTTTGAACATGAGGTTAAGCTGAACAAGTTGGCATTCATGCAGCAGTTCCACTTTGGAGTGTTTTATGCTTACGTTAAACTCAAAGAACAGGAAAGCAGAAATATAGTCTGGATTGCAGAATGCATTGCCCAGAAAAACAAGTCTAAAATTGACAACTATATTCCAATATTCTAAATCGATATTCTTTTAATAAGACATTGTAATAAGATATGAATCTTGAAATGATGAATCGATTGAAGTTTTTCACGCTGGAAAGAAATTTTTAAAAATTTGTTTTATCTGAAAAATGAGTTTACAGTCAAATTTTTGTGAAGTTTCATATAGATCGCACGTAAACTATCGAAAATATAGATTTGTCAAAACATGAAATTTTACAAAGAAAATAATGTCTGTTGGCAGGCAAATTTTGTCCGCCAGCATACATTTCTTTGTAAAAATTCTAAGGTCAAAAATCCATATCTTCTCCAGATTAGGGATAATCTTTACCAAATTTCACAATTTTACTAATATTGATACGATAAATTTTACTGCAAACTCCTTTTTCAGATAAAACAATTTTTTTTAAATTTCTTTCCGGCGTGAAAAACCTCAATATATAGGCCACGAGGCTCCCACGAATAGAAAACAAAAGAAATGTTGTCATACCTCAAGAGAATTGGAATGCATTTTTTGTTTGTTTATTCCTGGGAGCCTCGGTGTCAAGCAGAATATTTGAGACCTCAAAGGTGGTCTATTATCGAGTCTATTAAGCTCCAGAATTAATGAGACAATTATATAATAAATTAGATAGTCTTTTTTCTGACTTGGAGAAATAATTTAATAAGCTTTTTGTTTTATGGTAGTTGATTTGTTTGCTTAAAATCAATACTAACGCACTTTAAAATTGTACTTTCTCGGGGAAACAAAAATGTACAAAAACGTATACCGTTTAATATTTCTCAATATATTGATGATAAAAAGGAATTTTTGGTGAAGAAGTTGGTGGGAAAATATATGTATTAATATTAATCGCAAAGTATGGTTTTGTGGCCAGTGGCTCGTTTCTGGAAAGCCTCGTAAACTTTTCAGGCCCGAAAAGCCACCCCAAAAACCTGAATCACTTAGTTTACAGAGCTGTTCTTTTCACATGTTTTTAATACGAACAAAGTTAACTTTCATGCAAAGTTTCATGCCTATAAACTACTTTGTTTTGGAGATACAGATTTTTAAAGAAAGGCTTGTCGGGCACGATAAGCTTTCGGGGCTTTCGAGAAACGGGCCCCAGGTTTTTAAGTGAAACTCACTTATATCCAAATGCCATATACCAACACTTGAAGTTCTTGTGTTCATGGTGCAGTGTAATTGCTGATCAAGTCATCACCATGCCACAAGTTATGAAATTTTAGGTAGAATCCTATACATGGTTGAAATG

Protein

Uniprot

Uniprot term	Description
Q6PGV1	V-type proton ATPase subunit d 1 OS=Danio rerio OX=7955 GN=atp6v0d1 PE=1 SV=1
P51863	V-type proton ATPase subunit d 1 OS=Mus musculus OX=10090 GN=Atp6v0d1 PE=1 SV=2
P61420	V-type proton ATPase subunit d 1 OS=Bos taurus OX=9913 GN=ATP6V0D1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01992	vATP-synt_AC39	ATP synthase (C/AC39) subunit	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR044911	Homologous_superfamily	V-type ATP synthase c/d subunit, domain 3 superfamily	Interproscan
IPR016727	Family	ATPase, V0 complex, subunit d	Interproscan
IPR035067	Homologous_superfamily	V-type ATPase subunit C/d	Interproscan
IPR002843	Family	ATPase, V0 complex, c/d subunit	Interproscan
IPR036079	Homologous_superfamily	V-type ATP synthase subunit c/d subunit superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11028	VACUOLAR ATP SYNTHASE SUBUNIT AC39	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005765	Cellular Component	lysosomal membrane	Interproscan
GO:0005769	Cellular Component	early endosome	Interproscan
GO:0007034	Biological Process	vacuolar transport	Interproscan
GO:0007035	Biological Process	vacuolar acidification	Interproscan
GO:0016471	Cellular Component	vacuolar proton-transporting V-type ATPase complex	Interproscan
GO:0033179	Cellular Component	proton-transporting V-type ATPase, V0 domain	Interproscan
GO:0033181	Cellular Component	plasma membrane proton-transporting V-type ATPase complex	Interproscan
GO:0046961	Molecular Function	proton-transporting ATPase activity, rotational mechanism	Interproscan
GO:1902600	Biological Process	proton transmembrane transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K02146	ATPeV0D, ATP6D; V-type H+-transporting ATPase subunit d	-	Rheumatoid arthritis	ko05323	deepkoala