Detailed information of gene01991.t2 in Actinoscyphia liui

Genomic Location: chr1:31321584...31339367
NR annotation: XP_020905750.1, ATP-dependent RNA helicase DDX1 isoform X1 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A2VD92ATP-dependent RNA helicase DDX1 OS=Xenopus laevis OX=8355 GN=ddx1 PE=2 SV=1
Q90WU3ATP-dependent RNA helicase DDX1 OS=Gallus gallus OX=9031 GN=DDX1 PE=1 SV=1
Q0IIK5ATP-dependent RNA helicase DDX1 OS=Bos taurus OX=9913 GN=DDX1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00622SPRYSPRY domainFamilyInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF00270DEADDEAD/DEAH box helicaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003877DomainSPRY domainInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR014014DomainRNA helicase, DEAD-box type, Q motifInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR043136Homologous_superfamilyB30.2/SPRY domain superfamilyInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR011545DomainDEAD/DEAH box helicase domainInterproscan
IPR001870DomainB30.2/SPRY domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24031RNA HELICASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003724Molecular FunctionRNA helicase activityInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K13177DDX1; ATP-dependent RNA helicase DDX1EC:5.6.2.7
Transfer RNA biogenesisko03016deepkoala

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