Detailed information of gene01929.t1 in Actinoscyphia liui

Genomic Location: chr1:30450510...30480053
NR annotation: XP_020911043.1, alanine--tRNA ligase, cytoplasmic [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P21894Alanine--tRNA ligase, cytoplasmic OS=Bombyx mori OX=7091 PE=1 SV=1
Q9VLM8Alanine--tRNA ligase, cytoplasmic OS=Drosophila melanogaster OX=7227 GN=AlaRS PE=2 SV=1
Q8BGQ7Alanine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Aars1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02272DHHA1DHHA1 domainFamilyInterproscan
PF01411tRNA-synt_2ctRNA synthetases class II (A)FamilyInterproscan
PF07973tRNA_SADThreonyl and Alanyl tRNA synthetase second additional domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050058FamilyAlanine--tRNA ligaseInterproscan
IPR009000Homologous_superfamilyTranslation protein, beta-barrel domain superfamilyInterproscan
IPR003156DomainDHHA1 domainInterproscan
IPR018164DomainAlanyl-tRNA synthetase, class IIc, N-terminalInterproscan
IPR018163Homologous_superfamilyThreonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamilyInterproscan
IPR018162Homologous_superfamilyAlanine-tRNA ligase, class IIc, anti-codon-binding domain superfamilyInterproscan
IPR002318FamilyAlanine-tRNA ligase, class IIcInterproscan
IPR012947DomainThreonyl/alanyl tRNA synthetase, SADInterproscan
IPR023033FamilyAlanine-tRNA ligase, eukaryota/bacteriaInterproscan
IPR045864Homologous_superfamilyClass II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)Interproscan
IPR018165DomainAlanyl-tRNA synthetase, class IIc, core domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11777ALANYL-TRNA SYNTHETASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0002161Molecular Functionaminoacyl-tRNA editing activityInterproscan
GO:0004813Molecular Functionalanine-tRNA ligase activityInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0006419Biological Processalanyl-tRNA aminoacylationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0043039Biological ProcesstRNA aminoacylationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01872AARS, alaS; alanyl-tRNA synthetaseEC:6.1.1.7
Transfer RNA biogenesisko03016deepkoala

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