Detailed information of gene01925.t1 in Actinoscyphia liui

Genomic Location: chr1:30417512...30429816
NR annotation: XP_028517906.1, vacuolar protein sorting-associated protein 4B [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
D0FH76Vacuolar protein sorting-associated protein 4 OS=Bombyx mori OX=7091 GN=VPS4 PE=1 SV=1
P46467Vacuolar protein sorting-associated protein 4B OS=Mus musculus OX=10090 GN=Vps4b PE=1 SV=2
O75351Vacuolar protein sorting-associated protein 4B OS=Homo sapiens OX=9606 GN=VPS4B PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00004AAAATPase family associated with various cellular activities (AAA)DomainInterproscan
PF04212MITMIT (microtubule interacting and transport) domainDomainInterproscan
PF17862AAA_lid_3AAA+ lid domainDomainInterproscan
PF09336Vps4_CVps4 C terminal oligomerisation domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR003959DomainATPase, AAA-type, coreInterproscan
IPR007330DomainMIT domainInterproscan
IPR050304FamilyMicrotubule-severing AAA ATPaseInterproscan
IPR045253DomainVacuolar protein sorting-associated protein 4, MIT domainInterproscan
IPR003593DomainAAA+ ATPase domainInterproscan
IPR003960Conserved_siteATPase, AAA-type, conserved siteInterproscan
IPR041569DomainAAA ATPase, AAA+ lid domainInterproscan
IPR036181Homologous_superfamilyMIT domain superfamilyInterproscan
IPR015415DomainSpastin/Vps4, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23074AAA DOMAIN-CONTAININGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0007033Biological Processvacuole organizationInterproscan
GO:0016197Biological Processendosomal transportInterproscan
GO:0140603Molecular Functionobsolete ATP hydrolysis activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12196VPS4; vacuolar protein-sorting-associated protein 4-DNA repair and recombination proteinsko03400deepkoala

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