Detailed information of gene01431.t1 in Actinoscyphia liui

Genomic Location: chr1:21551446...21560198
NR annotation: XP_020912081.1, nucleolar protein 9 isoform X1 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
C5MFB4Nucleolar protein 9 OS=Candida tropicalis (strain ATCC MYA-3404 / T1) OX=294747 GN=NOP9 PE=3 SV=1
Q5B3J5Nucleolar protein 9 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=nop9 PE=3 SV=2
Q0U154Nucleolar protein 9 OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) OX=321614 GN=NOP9 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00806PUFPumilio-family RNA binding repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001313RepeatPumilio RNA-binding repeatInterproscan
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR040000FamilyNucleolar protein 9Interproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13102NUCLEOLAR PROTEIN 9Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0000056Biological Processribosomal small subunit export from nucleusInterproscan
GO:0000447Biological Processendonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0000472Biological Processendonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0000480Biological Processendonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0030686Cellular Component90S preribosomeInterproscan
GO:0030688Cellular Componentpreribosome, small subunit precursorInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14790NOP9; nucleolar protein 9-Ribosome biogenesisko03009deepkoala

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