Detailed information of gene01384.t1 in Actinoscyphia liui

Genomic Location: chr1:20887368...20911693
NR annotation: XP_028514136.1, tRNA-dihydrouridine(20) synthase [NAD(P)+]-like [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9NX74tRNA-dihydrouridine(20) synthase [NAD(P)+]-like OS=Homo sapiens OX=9606 GN=DUS2 PE=1 SV=1
Q9D7B1tRNA-dihydrouridine(20) synthase [NAD(P)+]-like OS=Mus musculus OX=10090 GN=Dus2 PE=1 SV=1
O74731tRNA-dihydrouridine(20) synthase [NAD(P)+] OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=dus2 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00035dsrmDouble-stranded RNA binding motifDomainInterproscan
PF01207DusDihydrouridine synthase (Dus)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018517Conserved_sitetRNA-dihydrouridine synthase, conserved siteInterproscan
IPR044463DomainDUS2, double-stranded RNA binding domainInterproscan
IPR052582FamilytRNA-dihydrouridine synthase-likeInterproscan
IPR014720DomainDouble-stranded RNA-binding domainInterproscan
IPR035587DomainDUS-like, FMN-binding domainInterproscan
IPR013785Homologous_superfamilyAldolase-type TIM barrelInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45936TRNA-DIHYDROURIDINE(20) SYNTHASE [NAD(P)+]-LIKEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008033Biological ProcesstRNA processingInterproscan
GO:0017150Molecular FunctiontRNA dihydrouridine synthase activityInterproscan
GO:0050660Molecular Functionflavin adenine dinucleotide bindingInterproscan
GO:0000049Molecular FunctiontRNA bindingInterproscan
GO:0002943Biological ProcesstRNA dihydrouridine synthesisInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K05543DUS2; tRNA-dihydrouridine synthase 2EC:1.3.1.91
Transfer RNA biogenesisko03016deepkoala

TOP