| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| ctg871-2.5-1 | ADENOMATOUS POLYPOSIS COLI PROTEIN FAMILY | chr5 | 23121818 | 23126288 | + |
| CDS | |||||
| ctg871-2.5-1 | |||||
| Transcript |
| ctg871-2.5-1 |
| Protein |
| ctg871-2.5-1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00514 | Arm | Armadillo/beta-catenin-like repeat | Repeat | Interproscan |
| PF05972 | APC_15aa | APC 15 residue motif | Motif | Interproscan |
| PF18797 | APC_rep | Adenomatous polyposis coli (APC) repeat | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000225 | Repeat | Armadillo | Interproscan |
| IPR009240 | Repeat | Adenomatous polyposis coli protein, 15 residue repeat | Interproscan |
| IPR011989 | Homologous_superfamily | Armadillo-like helical | Interproscan |
| IPR016024 | Homologous_superfamily | Armadillo-type fold | Interproscan |
| IPR026818 | Family | Adenomatous polyposis coli (APC) family | Interproscan |
| IPR041257 | Repeat | Adenomatous polyposis coli (APC) repeat | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12607 | ADENOMATOUS POLYPOSIS COLI PROTEIN FAMILY | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0001708 | Biological Process | cell fate specification | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005881 | Cellular Component | cytoplasmic microtubule | Interproscan |
| GO:0007026 | Biological Process | negative regulation of microtubule depolymerization | Interproscan |
| GO:0007389 | Biological Process | pattern specification process | Interproscan |
| GO:0007399 | Biological Process | nervous system development | Interproscan |
| GO:0008013 | Molecular Function | beta-catenin binding | Interproscan |
| GO:0008017 | Molecular Function | microtubule binding | Interproscan |
| GO:0016055 | Biological Process | Wnt signaling pathway | Interproscan |
| GO:0016342 | Cellular Component | catenin complex | Interproscan |
| GO:0016477 | Biological Process | cell migration | Interproscan |
| GO:0030178 | Biological Process | negative regulation of Wnt signaling pathway | Interproscan |
| GO:0030877 | Cellular Component | beta-catenin destruction complex | Interproscan |
| GO:0045295 | Molecular Function | gamma-catenin binding | Interproscan |
| GO:0045595 | Biological Process | regulation of cell differentiation | Interproscan |
| GO:0045732 | Biological Process | positive regulation of protein catabolic process | Interproscan |
| GO:0090090 | Biological Process | negative regulation of canonical Wnt signaling pathway | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for ctg871-2.5-1 global RNA-seq network |